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Searching data from npg files ( Primegrid)
I do search
awk /40...../ t17_b2_k??.npg >ex.txt awk /40...../ t17_b2_k1??.npg >>ex.txt [COLOR=Blue]awk /40...../ t17_b2_k4??.npg >>ex.txt[/COLOR] sort -n -k2,2 -k1,1 ex.txt > EXSORT4.txt rm ex.txt and result I got ... 21 4099999 31 4099999 181 4099999 [COLOR=Red]405 4100001 401 4100002[/COLOR] ... [COLOR=Red]409 4999985 407 4999994[/COLOR] So why is my search limit "broken" but only for K from 400 - 410? |
Include space to the search pattern:
awk /\ 40...../ t17_b2_k??.npg I use this construction for cut ranges from the .npg files: awk '{if (($2>4000000) && ($2<4100000)) print $0}' 5.npg |
Thanks!
Works perfectly well :) |
[QUOTE=unconnected;427643]I use this construction for cut ranges from the .npg files:
awk '{if (($2>4000000) && ($2<4100000)) print $0}' 5.npg[/QUOTE] awk is a good tool to use for many operations with npg files. Especially when you are dealing with wide ranges of values (over one power of magnitude; grep patterns are still possible but ugly). Yet another way for capturing a range like this is 'int($2/100000)==40' All of these are equivalent (note that is you are only [B]print[/B]'ing then [B]awk 'condition'[/B] is equivalent to [B]awk '{if(condition){print}}' [/B]): [CODE]awk '{if (($2>=4000000) && ($2<4100000)) print $0}' 5.npg awk '$2>=4000000 && $2<4100000' 5.npg awk 'int($2/100000)==40' 5.npg # Unrelated; here is a simple trick to find squares in the first column awk 'int(sqrt($1+0.1))**2==$1' 5.npg # here +0.1 is to avoid rare sqrt return values like 719.9999, costs nothing[/CODE] |
My next problem is
in npg file I have data 21 4099999 31 4099999 181 4099999 I now know how to extract needed data from npeg file, but I wont next step when data is extracted, then, new ( same file) is created, and extracted data is removed example.: from above data, 31 4099999 is removed, and now npeg file contain only 21 4099999, and 181 4099999 It is easy to manually remove one or two data lines, but when you do on large scale... is it bit hard to do manually |
It is possible to fiddle this sort of thing by using srfile. Assuming that the npg file is of a form supported by srfile then you can just get it to output it in npg format with -g which will be a file for each k. You can then recombine them after deleting the unwanted ks by outputting in prp format which is what you are in currently(combined npg files).
Looking back at the question this might not answer it. If necessary you can change the header to an abc header and trick it to do lots of things. |
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